Main Window

 

File menu
Options menu
Oligonucleotide text boxes
3' position boxes
Result summary textbox

The primer set or probe to be checked is entered in this window, either manually or by loading a pre-prepared oligo file via the File menu.  Database(s) to be checked against are then loaded by selecting the 'Load Database' button.  Once this has been done the analysis can take place by clicking on the 'Do Analysis' button.  Analysis complete, and a result summary is displayed in the main text box of this window.  Clicking on 'View Results' enables a full breakdown on the results to be viewed.  The options pull-down menu enables the user to alter certain parameters associated with the analysis.