CLUSTAL W (1.83) multiple sequence alignment


U00096          AAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAA
AY354848.1      -------TGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAA
AY354844.1      --------GAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGTAGGCTTAACACATGCAA
AY354808.1      -------TGAGTTTGATCCTGGCTCAGGATGAACGCTAGCGGCAGGCTTAACACATGCAA
AY354807.1      -------TGAGTTTGATCCTGGCTCAGGATGAACGCTAGCGGCAGGCTTAACACATGCAA
                        ********** ********  ******** **** **** ************

U00096          GTCGAACGGTAACAGGAAGAAGCTTGCTTCTTTGCTGACGAGTGGCGGACGGGTGAGTAA
AY354848.1      GTCGAGCGGTAACAGAGAGTAGCTTGCTACTTTGCTGACGAGCGGCGGACGGGTGAGTAA
AY354844.1      GTCGTGCG-----AGAWAGTATCTTCGGATATGAGTA--GAGCGGCGGACGGGTGAGTAA
AY354808.1      GTAGAACGGTAACAGAGAG-AGCTTGCT-CTCTGCTGACGAGTTGCGAACGGGTGCGTAA
AY354807.1      GTAGAACGGTAACAGAGAG-AGCTTGCT-CTCTGCTGACGAGTTGCGAACGGGTGCGTAA
                ** *  **     **  ** * ***          *   ***  *** ******* ****

U00096          TGTCTGGG-AAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCA
AY354848.1      TGCTTGGG-AACATGCCTTTAGGTGGGGGACAACAGTTGGAAACGACTGCTAATACCGCA
AY354844.1      CGCGTAGG-AATCTACCTAGTAGAAGGGGATAGCCCGGGGAAACCCGGATTAATACCGTA
AY354808.1      CGCGTATGCAACCTACCCATAACAGGGGGATAGCCCATAGAAATGTGGATTAATACCCCA
AY354807.1      CGCGTATGCAACCTACCCATAACAGGGGGATAGCCCATAGAAATGTGGATTAATACCCCA
                 *  *  * **  * **        ***** * *     ****       *******  *

U00096          TAACGTCGCAAGACCAAAGAGGGGGAC-CTTCGGGCCTCT-TGCCATCGGATGTGCCCAG
AY354848.1      TAACGTCTACGGACCAAAGGGGG-----CTTCGG--CTCT-CGCCTAAAGATTGGCCCAA
AY354844.1      TACCTCCTTCGGGAGAAAGAAGGCCTCTCTTTGAAGCTTT-CGCTACTAGATGAGCCTGC
AY354808.1      TAACATCATTTTCTGGCATCAGGAAATGATTAAAACTCCGGTGGTTATGGATGGGCATGC
AY354807.1      TAACATCATTTTCTGGCATCAGAAAATGATTAAAACTCCGGTGGTTATGGATGGGCATGC
                ** *  *          *   *       **           *      ***  **    

U00096          ATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTG
AY354848.1      GTGGGATTAGCTAGTTGGTGAGGTAATGGCTCACCGAGGCAACGATCCCTAGCTGGTTTG
AY354844.1      GTAAGATTAGCTTGTTGGTGAGGTAAAGGCTCACCAAGGCTACGATCTTTAGCTGGTCTG
AY354808.1      GTGACATTAGCTAGTTGGTGAGGTAACTGCTCACCAAGGCAACGATGTCTAGGGGTTCTG
AY354807.1      GTGACATTAGCTAGTTGGTGAGGTAACTGCTCACCAAGGCAACGATGTCTAGGGGTTCTG
                 *   ******* ** **** *****  ******* **** *****   ***  * * **

U00096          AGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAG
AY354848.1      AGAGGATGATCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAG
AY354844.1      AGAGGACGATCAGCCACATTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAG
AY354808.1      AGAGGATGATCCCCCACACTGGTACTGAGACACGGACCAGACTCCTACGGGAGGCAGCAG
AY354807.1      AGAGGATGATCCCCCACACTGGTACTGAGACACGGACCAGACTCCTACGGGAGGCAGCAG
                ****** ** *  ***** *** ************ ************************

U00096          TGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCCATGCCGCGTGTATGAAGAAGG
AY354848.1      TGGGGAATATTGCACAATGGGCGAAAGC-TGATGCAGCCATGCCGCGTGTGTGAAGAAGG
AY354844.1      TGGGGAATATTGGACAATGGGCGCAAGC-TGATCCAGCCATACCGCGTGTGTGAAGAAGG
AY354808.1      TGAGGAATATTGCGCAATGGAGGAAACTCTGACGCAGCCATGCCGCGTGCAGGAAGACTG
AY354807.1      TGAGGAATATTGCGCAATGGAGGAAACTCTGACGCAGCCATGCCGCGTGCAGGAAGACTG
                ** *********  ******  * **   ***  ******* *******   *****  *

U00096          CCTT-CGGGTTGTAAAGTACTTTCAGCGGGGAGGAAGGGAGTAAAGTTAATACCTTTGCT
AY354848.1      CCTT-CGGGTTGTAAAGCACTTTCAGTCAGGAGGAAAGGTTAGTAGTTAATACCTGCTAG
AY354844.1      CCTT-CGGGTTGTAAAGCACTTTAAGCAGGGAGAAAAAGTTATAAGTTAATATCTTATAA
AY354808.1      CCCTATGGGTTGTAAACTGCTTTTATATAGGAAGAA----CTACAGCTA-CGTGTAGCTG
AY354807.1      CCCTATGGGTTGTAAACTGCTTTTATATAGGAAGAA----CTACAGCTA-CGTGTAGCTG
                ** *  **********   **** *    ***  **        ** **     *     

U00096          CATTGACGTTACCCGCAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATAC
AY354848.1      CTGTGACGTTACTGACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATAC
AY354844.1      CCCTGATGTTACCTGCAGAATAAGCACCGGCTAATTCCGTGCCAGCAGCCGCGGTAATAC
AY354808.1      TTTTGACGGTACTATACGAATAAGGACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATAC
AY354807.1      TTT-GACGGTACTATACGAATAAGGACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATAC
                    ** * ***     *** *** ********* *************************

U00096          GGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAA
AY354848.1      GGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTACGCAGGCGGTTTGTTAA
AY354844.1      GGAAGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTAGGTGGTTTGTTAA
AY354808.1      GGAGGGTCCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTCCGTAGCGGGGTCATTAA
AY354807.1      GGAGGGTCCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTCCGTAGCGGGGTCATTAA
                *** *** * *******  **** *** ****  ***** *  ** **  ** *  ****

U00096          GTCAGATGTGAAATCCCCGGGCTCAACCTGGGAACTGCATCTGATACTGGCAAGCTTGAG
AY354848.1      GCGAGATGTGAAAGCCCCGGGCTCAACCTGGGAACTGCATTTCGAACTGGCAAACTAGAG
AY354844.1      GTTGGATGTGAAAGCCCTGGGCTCAACCTAGGAACTGCATCCAAAACTAACTCACTAGAG
AY354808.1      GTCAGTGGTGAAATCYTACAGCTCAACTGTAGAACTGCCATTGAAACTGATGACCTTGAG
AY354807.1      GTCAGTGTTGAAATCCTACAGCTCAACTGTAGA-CTGCCATTGAAACTGATGACCYTGAG
                *   *   ***** *     *******    ** ****       ***      *  ***

U00096          TCTCGTAGAGGGGGGTAGAATTCCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAA
AY354848.1      TGTGATAGAGGGTGGTAGAATTTCAGGTGTAGCGGTGAAATGCGTAGAGATCTGAAGGAA
AY354844.1      TACGATAGAGGGAGGTAGAATTCATAGTGTAGCGGTGGAATGCGTAGATATTATGAAGAA
AY354808.1      TATAATTGAAGTGGGCGGAATGTGTCATGTAGCGGTGAAATGCTTAGACATGCCACAGAA
AY354807.1      TATAATTGAAGTGGGCGGAATGTGTCATGTAGCGGTGAAATGCTTAGATATGCCACAGAA
                *    * ** *  **  ****      ********** ***** **** **      ***

U00096          TACCGGT-GGCGAAGGCGGCCCCCTGGA-CGAAGACTGACGCTCAGGTGCGAAA-GCGTG
AY354848.1      TACCGATTGGCGAAGGCAGCCACCTGGG-TCAACACTGACGCTCATGTACGAAAAGCGTG
AY354844.1      TACCAGT-GGCGAAGGCGGCCTCCTGGA-TCTGTACTGACACTGAGGTGCGAAA-GCGTG
AY354808.1      CACCGAT-TGCGAAGGCAGCTCACTAAG-TTATAACTGACGCTGAGGGACGAAA-GCGTG
AY354807.1      CACCGAT-TGCGAAGGCAGCTCACTARGGTTATAMCTGACGCTGAGGGACGAAA-GCGTG
                 ***  *  ******** **   **          ***** ** * *  ***** *****

U00096          GGGAGCAAACAGGATT-AGATACCCTGGTAGTCCACGCCGTAAACGATGTCGACTTGGAG
AY354848.1      GGGAGCAWACAGGATTCAGATACCCTGGTAGTCCACGCCGTAAACGATGTCTACTAGAAG
AY354844.1      GGTAGCGAACAGGATT-AGATACCCTGGTAGTCCACGCCGTAAACGATGACAACTAGCTG
AY354808.1      GGTAGCGAACAGGATT-AGATACCYTGGTAGTCCACGCCGTAAACGATGTATACTCGTTG
AY354807.1      GGTAGCGAACAGGATT-AGATACCTTGGTAGTCCACGCCGTAAACGATGTATACTCGTTG
                ** ***  ******** ******* ************************   *** *  *

U00096          GTTGTGCCCTTGAGGCGTGGCTTCCGGAGCT-AACGCGTTAAGTCGACCGCCTGGGGAGT
AY354848.1      CTCGGAGCCTC-AGTTCTGTTTTTCAWAACKTAACGCATTAAGTAGACCGCTTGGGGAGT
AY354844.1      TTGTAAGACAATGTCTTTCAGTGGCGGCAGT-AACGCTTTAAGTTGTCCGCCTGGGGAGT
AY354808.1      CTGGCGATACACAG---TCAGTGACCAAGCG-AAAGTATTAAGTATACCACCTGGGGAGT
AY354807.1      CTGGCGATACACAG---TCAGTGACCAAGCG-AAAGTATTAAGTATACCACCTGGGGAGT
                 *               *   *  *       ** *  ******   ** * ********

U00096          ACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATG
AY354848.1      ACGGCCGCAAGGTTAAGACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATG
AY354844.1      ACGGCCGCAAGGCTAAAACTCAAATGAATTGACGGGGACCCGCACAAGCGGTGGAGCATG
AY354808.1      ACGCTCGCAAGAGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATG
AY354807.1      ACGCTCGCAAGAGTGAMACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATG
                ***  ******  * * ******* ************ **********************

U00096          TGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGACATCCACAGAACTTTCC
AY354848.1      TGTTTTAATTCGATGCAACGCGAAGAACCTTACCTACACTTGACATACAGAGAACTTACC
AY354844.1      TGGTTTAATTCGATGCAACGCGAAAAACCTTACCTACTCTTGACATACTTGGGAGCT-CT
AY354808.1      TGGTTTAATTCGATGATACGCGAGGAACCTTACCTGGGCTTAA-ATGCAGAACGACAGGC
AY354807.1      TGGTTTAATTCGATGATACGCGAGGAACCTTACCTGGGCTTAA-ATGCAGAACGACAGGC
                ** ************  ******  **********   *** * ** *            

U00096          AGAGATGGATTGGTGCCTTCGGGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTC
AY354848.1      AGAGATGGTTTGGTGCCTTCGSGAACTCTGATACAGGTGCTGCATGGCTGTCGTCAGCTC
AY354844.1      TGTAATGAGAGTGTGCCTTTTGGAACCAAGATACAGGTGCTGCATGGCTGTCGTCAGCTC
AY354808.1      TATGAAAATAGCTTTTCTTCGGACGTTTTGCAA--GGTGCTGCATGGTTGTCGTCAGCTC
AY354807.1      TATGAAAATAGCTTTTCTTCGGACGTTTTGCAA--GGTGCTGCATGGTTGTCGTCAGCTC
                    *        *  ***          *  *  ************ ************

U00096          GTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAG
AY354848.1      GTGTTGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATCCTTAGTTGCTAG
AY354844.1      GTGTCGTGAGATGTTCCGTTAAGTCGGATAGCGAGCGCAACCCTTACCCTTATTTGCCAG
AY354808.1      GTGCCGTGAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATTCTTAGTTGCCAG
AY354807.1      GTGCCGTGAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATTCTTAGTTGCCAG
                ***  ****  ****  ********    * ************ **   **  **** **

U00096          C-GGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATG
AY354848.1      CAGGTAATGCTGAGAACTCTAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGACG
AY354844.1      C-GATTCGGTCGGGAACTATAAGGGGACTGCCGGTGATAAACCGGAGGAAGGTGAGGACG
AY354808.1      C-GATTCGGTCGGGGACTCTAGGAAAACTGCCCGCGCAAGCGTGGAGGAAGGTGGGGATG
AY354807.1      C-GATTCGGTCGGGGACTCTAGGAAAACTGCCCGCGCAAGCGTGGAGGAAGGTGGGGATG
                * * *   *  * * ***  * *   ****** * *  *    *********** *** *

U00096          ACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGCGCATACA
AY354848.1      ACGTCAAGTCATCATGGCCCTTACGTGTAGGGCTACACACGTGCTACAATGGCGCATACA
AY354844.1      ACGTCAAGTCATCATGGCCCTTACGAGTAGGGCTACACACGTGCTACAATGGGAAATACA
AY354808.1      ACGTCAAATCATCACGGCCCTTACGTCCAGGGCCACACACGTGCTACAATGGTAGGGACA
AY354807.1      ACGTCAAATCATCACGGCCCTTACGTCCAGGGCCACACACGTGCTACAATGGTAGGGACA
                ******* ****** **********   ***** ******************     ***

U00096          AAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGG
AY354848.1      GAGTGCTGCGAACTTGCGAGAGTAAGCGAATCACTTAAAGTGCGTCGTAGTCCGGATTGG
AY354844.1      GACGGACGCTAAGCCGCGAGGTGGTGCTAATCCTAGAAAGTTTCTCGTAGTCCGGATTGG
AY354808.1      GAGGGCAGCCACCTGGTGACAGGGAGCGAATCCTA-AAACCCTATCTCAGTTCGGATCGG
AY354807.1      GAGGGCAGCCACCTGGTGACAGGGAGCGAATCCTA-AAACCCTATCTCAGTTCGGATCGG
                 *  *  ** *    * **      **  * *    ***     **  *** ***** **

U00096          AGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGGATCAGA-ATGCCAC
AY354848.1      AGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCGTATCAGA-ATGACGC
AY354844.1      AGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCGGATCAGC-ATGCCGC
AY354808.1      AGTCTGCAACTCGACTCCGTGAAGCTGGAATCGCTAGTAATCGCGCATCAGCCATGGCGC
AY354807.1      AGTCTGCAACTCGACTCCGTGAAGCTGGAATCGCTAGTAATCGCGCATCAGCCATGGCGC
                ****************** *****  ***************** * *****  *** * *

U00096          GGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAA
AY354848.1      GGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCTC
AY354844.1      GGTGAATACGTTCTCGGGTCTTGTACACACCGCCCGTCACACCATGGAAGTGGATTGCAC
AY354808.1      GGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCAAGCCATGGAAGCCGGGAGTGC
AY354807.1      GGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCAAGCCATGGAAGCTGGGAGTGC
                ************* **** ********************  ****** **  *   *   

U00096          AAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGG
AY354848.1      CAGAAGTAGATAGTCTAACCCTCGGGAGGACGTTTACCACGGAGTGATTCATGACTGGGG
AY354844.1      CAGAAGTAGATAGTCTAACCTTAGGGAGGGCGTTTACCACGGTGTGCTTCATGACTGGGG
AY354808.1      CTGAAGTCGGTAACC---------GCAAGGAGCCGCCTAGGGTAAAACTGGTAACTGGGG
AY354807.1      CTGAAGTCGGTAACC---------GCAAGGAGCCGCCTAGGGTAAAACTGGTAACTGGGG
                  ***** * **            * * *  *    * *         *  * *******

U00096          TGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTA
AY354848.1      TGTAGTCGTAACAAG-TACCC--------------------------------
AY354844.1      TGTAGTCGTAACAAGGTACCCGT------------------------------
AY354808.1      C-TAGTCGTAACAAGGTACCCGT------------------------------
AY354807.1      C-TAGTCGTAACAAGGTATCCG-------------------------------
                   ************ ** **